Search results for "Calcareous sponge"

showing 10 items of 10 documents

Common genetic denominators for Ca++-based skeleton in Metazoa: role of osteoclast-stimulating factor and of carbonic anhydrase in a calcareous spong…

2012

Calcium-based matrices serve predominantly as inorganic, hard skeletal systems in Metazoa from calcareous sponges [phylum Porifera; class Calcarea] to proto- and deuterostomian multicellular animals. The calcareous sponges form their skeletal elements, the spicules, from amorphous calcium carbonate (ACC). Treatment of spicules from Sycon raphanus with sodium hypochlorite (NaOCl) results in the disintegration of the ACC in those skeletal elements. Until now a distinct protein/enzyme involved in ACC metabolism could not been identified in those animals. We applied the technique of phage display combinatorial libraries to identify oligopeptides that bind to NaOCl-treated spicules: those oligop…

Anatomy and PhysiologyMarine and Aquatic Scienceslcsh:MedicineBiochemistryCalcium Chloridechemistry.chemical_compoundMolecular Cell BiologySycon raphanuslcsh:ScienceCarbonic AnhydrasesSclerocytechemistry.chemical_classification0303 health sciencesMultidisciplinaryCalcareous spongebiology030302 biochemistry & molecular biologyIntracellular Signaling Peptides and ProteinsRecombinant ProteinsAmorphous calcium carbonatePoriferaEnzymesChemistrymedicine.anatomical_structureBiochemistryMedicineOligopeptidesResearch ArticleBiotechnologyDNA ComplementaryMolecular Sequence DataMarine BiologyCalcium Carbonate03 medical and health sciencesSponge spiculeOsteoclastCarbonic anhydraseChemical BiologymedicineAnimalsAmino Acid SequenceBiology030304 developmental biologySequence Homology Amino AcidEvolutionary Developmental Biologylcsh:Rbiology.organism_classificationEnzymechemistryEarth Sciencesbiology.proteinCalciumlcsh:QPeptidesPhysiological ProcessesDevelopmental BiologyPLoS ONE
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Flexible minerals: self-assembled calcite spicules with extreme bending strength.

2013

Flexi-Fibers Glass or metal fibers can show incredible flexibility. Natalio et al. (p. 1298 ; see the Perspective by Sethmann ) used the protein silicatein-α, which is responsible for the biomineralization of silicates in sponges, to guide the formation of spicules made of calcite. These synthetic spicules could be bent to a high degree because of their inherent elasticity, whilst retaining the ability to guide light.

CalciteSpiculeMultidisciplinaryMaterials scienceCalcareous spongebiologySyconMineralogybiology.organism_classificationCathepsinsAmorphous solidCalcium CarbonatePoriferachemistry.chemical_compoundSponge spiculechemistryFlexural strengthMicroscopy Electron TransmissionSpectroscopy Fourier Transform InfraredAnimalsNanoparticlesStress MechanicalComposite materialBiomineralizationScience (New York, N.Y.)
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The sponge silicatein-interacting protein silintaphin-2 blocks calcite formation of calcareous sponge spicules at the vaterite stage

2013

Ca-carbonate, the inorganic matrix of the spicules from the calcareous sponges, is formed as the result of an enzyme-catalyzed reaction with the carbonic anhydrase [CA] as a decisive component. The growth and the morphology of the spicules are genetically controlled, and are taxon-specific. In the present study it is shown that the silicatein-interacting protein silintaphin-2 is present at the surface of the siliceous spicules of the demosponge Suberites domuncula and prevents the association of calcareous crystals synthesized in vitro to these skeletal elements. Silintaphin-2 comprises a Ca2+-binding domain that is formed by a 22 amino acid-long peptide, N-DDDSQGEIQSDMAEEEDDDNVD-C. This ve…

CalcitebiologyCalcareous spongeChemistryGeneral Chemical EngineeringGeneral Chemistrybiology.organism_classificationSuberites domunculaSpongechemistry.chemical_compoundCrystallographySponge spiculeDemospongeVateriteCalcareousRSC Adv.
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Phylogenetic Position of the Hexactinellida Within the Phylum Porifera Based on the Amino Acid Sequence of the Protein Kinase C from Rhabdocalyptus d…

1998

Recent analyses of genes encoding proteins typical for multicellularity, especially adhesion molecules and receptors, favor the conclusion that all metazoan phyla, including the phylum Porifera (sponges), are of monophyletic origin. However, none of these data includes cDNA encoding a protein from the sponge class Hexactinellida. We have now isolated and characterized the cDNA encoding a protein kinase C, belonging to the C subfamily (cPKC), from the hexactinellid sponge Rhabdocalyptus dawsoni. The two conserved regions, the regulatory part with the pseudosubstrate site, the two zinc fingers, and the C2 domain, as well as the catalytic domain were used for phylogenetic analyses. Sequence al…

DNA ComplementaryMolecular Sequence DataSequence alignmentCatalysisEvolution MolecularBotanyGeneticsAnimalsAmino Acid SequenceSycon raphanusCloning MolecularMolecular BiologyPhylogenyProtein Kinase CEcology Evolution Behavior and SystematicsbiologyPhylogenetic treeCalcareous spongePhylumHexactinellidbiology.organism_classificationPoriferaProtein Structure TertiarySuberites domunculaSpongeEvolutionary biologySequence AnalysisJournal of Molecular Evolution
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Evolution of Early Metazoa: Phylogenetic Status of the Hexactinellida Within the Phylum of Porifera (Sponges)

1998

The evolution of the Metazoa from their protozoan ancestors is one of the greatest puzzles of phylogeny (Willmer 1994; Cavalier-Smith et al. 1996). The emergence of multicellular animals has been explained by two major theories: the syncytial theory (Hadzi 1963) - origin from a multinucleated ciliate - and the colonial theory (Haeckel 1868) - origin from a colonial flagellate - both of which assume a di(poly)phyletic origin of the Metazoa. Numerous attempts to resolve whether the Metazoa are of mono- or polyphyletic origin have sought evidence from a wide variety of developmental and morphological data such as body symmetry, type of development (protostome vs. deuterostome), type of body ca…

DeuterostomebiologyCalcareous spongePhylumPhylogeneticsmedia_common.quotation_subjectPolyphylyZoologyProtostomeFlagellatebiology.organism_classificationPhyletic gradualismmedia_common
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Biocalcite, a multifunctional inorganic polymer: Building block for calcareous sponge spicules and bioseed for the synthesis of calcium phosphate-bas…

2014

Calcium carbonate is the material that builds up the spicules of the calcareous sponges. Recent results revealed that the calcium carbonate/biocalcite-based spicular skeleton of these animals is formed through an enzymatic mechanism, such as the skeleton of the siliceous sponges, evolutionarily the oldest animals that consist of biosilica. The enzyme that mediates the calcium carbonate deposition has been identified as a carbonic anhydrase (CA) and has been cloned from the calcareous sponge species Sycon raphanus. Calcium carbonate deposits are also found in vertebrate bones besides the main constituent, calcium phosphate/hydroxyapatite (HA). Evidence has been presented that during the init…

Materials scienceGeneral Physics and Astronomychemistry.chemical_elementMineralogyReview02 engineering and technologyCalciumlcsh:Chemical technologybonelcsh:Technologysponge03 medical and health scienceschemistry.chemical_compoundVateriteNanotechnologylcsh:TP1-1185General Materials SciencebiocalciteSycon raphanusElectrical and Electronic Engineeringlcsh:Sciencebone formation030304 developmental biologycalcareous spiculesCalcite0303 health sciencesbiologyCalcareous spongelcsh:T021001 nanoscience & nanotechnologybiology.organism_classificationlcsh:QC1-999NanoscienceSpongeCalcium carbonatechemistryChemical engineeringlcsh:Q0210 nano-technologybioprintingCalcareouslcsh:PhysicsBeilstein Journal of Nanotechnology
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The enzyme carbonic anhydrase as an integral component of biogenic Ca-carbonate formation in sponge spicules

2013

The inorganic scaffold of the spicules, the skeletal elements of the calcareous sponges, is formed of calcium carbonate (CaCO3). The growth of the approximately 300-μm large spicules, such as those of the calcareous sponge Sycon raphanus used in the present study, is a rapid process with a rate of about 65 μm/h. The formation of CaCO3 is predominantly carried out by the enzyme carbonic anhydrase (CA). The enzyme from the sponge S. raphanus was isolated and prepared by recombination. The CA-driven deposition of CaCO3 crystallites is dependent on temperature (optimal at 52 °C), the pH value of the reaction assay (7.5/8.0), and the substrate concentration (CO2 and Ca2+). During the initial pha…

Mineralogy010402 general chemistry01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular Biology03 medical and health scienceschemistry.chemical_compoundSponge spiculeSpongeSycon raphanus030304 developmental biologyCalcite0303 health sciencesCarbonic anhydrasebiologyCalcareous spongebiology.organism_classification0104 chemical sciencesSpongeCalcium carbonatechemistryChemical engineeringSycon raphanusCarbonateCalcareous spiculesCrystal formationCalcareousFEBS Open Bio
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Purification and partial characterization of a lectin protein complex, the clathrilectin, from the calcareous sponge Clathrina clathrus

2016

Carbohydrate-binding proteins were purified from the marine calcareous sponge Clathrina clathrus via affinity chromatography on lactose and N-acetyl glucosamine- agarose resins. Proteomic analysis of acrylamide gel separated protein subunits obtained in reducing conditions pointed out several candidates for lectins. Based on amino- acid sequence similarity, two peptides displayed homology with the jack bean lectin Concanavalin A, 
 including a conserved domain shared by proteins in the L-type lectin superfamily. An N-acetyl glucosamine - binding protein complex, named clathrilectin, was further purified via gel filtration chromatography, bioguided with a diagnostic rabbit erythrocyte haemag…

Proteomics0301 basic medicinePhysiologySyconBiochemistry03 medical and health sciencesAffinity chromatographyLectinsAnimalsTrypsinMolecular Biology030102 biochemistry & molecular biologybiologyCalcareous spongeHemagglutinationLectinClathrina clathrusbiology.organism_classificationMolecular biologyCell aggregationPoriferaPorifera ; Clathrina clathrus ; lectin ; N-acetyl-glucosamine ; cell aggregation ; proteomicsSponge030104 developmental biologyBiochemistryConcanavalin AProteolysisbiology.proteinCarbohydrate MetabolismFemaleRabbitsComparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
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Early evolution of metazoan serine/threonine and tyrosine kinases: identification of selected kinases in marine sponges.

1997

The phylum Porifera (sponges) was the first to diverge from the common ancestor of the Metazoa. In this study, six cDNAs coding for protein-serine/threonine kinases (PS/TKs) are presented; they have been isolated from libraries obtained from the demosponges Geodia cydonium and Suberites domuncula and from the calcareous sponge Sycon raphanus. Sequence alignments of the catalytic domains revealed that two major families of PS/TK, the "conventional" (Ca(2+)-dependent) protein kinase C (PKC), the cPKC subfamily, as well as the "novel" (Ca(2+)-independent) PKC (nPKC), form two separate clusters. In each cluster, the sequence from S. raphanus diverges first. To approach the question about the or…

animal structuresSubfamilyDNA ComplementaryMolecular Sequence DataProtein Serine-Threonine KinasesEvolution MolecularSpecies SpecificityGeneticsAnimalsSycon raphanusAmino Acid SequenceCloning MolecularProtein kinase AMolecular BiologyEcology Evolution Behavior and SystematicsProtein kinase CPhylogenyProtein Kinase CCalcareous spongebiologySequence Homology Amino AcidKinaseProtein-Tyrosine Kinasesbiology.organism_classificationPoriferaSuberites domunculaBiochemistryTyrosine kinaseMolecular biology and evolution
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Analysis of the Sponge [Porifera] Gene Repertoire: Implications for the Evolution of the Metazoan Body Plan

2003

Sponges [phylum Porifera] form the basis of the metazoan kingdom and represent the evolutionary earliest phylum still extant. Hence, as living fossils, they are the taxon closest related to the hypothetical ancestor of all Metazoa, the Urmetazoa. Until recently, it was still unclear whether sponges are provided with a defined body plan. Only after the cloning, expression and functional studies of characteristic metazoan genes, could it be demonstrated that these animals comprise the structural elements which allow the sponge cells to organize themselves according to a body plan. Adhesion molecules involved in cell—cell and cell—matrix interactions have been identified. Among the cell—cell a…

education.field_of_studybiologyCalcareous spongeCell adhesion moleculeAnatomybiology.organism_classificationCell biologySpongeMyotrophinBody planSponge spiculeeducationMorphogenGalectin
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